Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCFSPILEINMQSESNITVRDDIDDINTNMYQPLSYPLSFQVSLTGFLMLEIVLGLGSNLTVLVLYCMKSNLINSVSNIITMNLHVLDVIICVGCIPLTIVILLLSLESNTALICCFHEA----CVSFASVSTAINVFAITLDRYDISVKP--ANRILTMGRAVMLMISIWIFSFFSFLIPFIEVNFFSL-QSGNTWENKTLLCVSTNEYYTELGMYYHLLVQIPIFFFTVVVMLITYTKILQALNIRIGTRFSTGQKKKARKKKTISLTTQHEATDMSQSSGGRNVVFGVRTSVSVIIALRRAVKRHRERRERQKRVFRMSLLIISTFLLCWTPISVLNTTILCLGPSDLLVKLRLCFLV--MAYGTTIFHPLLYAFT---RQKFQKVLKSKMKKRVVSIVEADPLPNNAVIHNSWIDPKRNKKITFEDSEIREKCLVPQVVTD |
| 3SN6 Chain:R ((186-489)) | ---------------------------------------------GIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVT-ASIET---LCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLP-IQMHWYR-QEAINCYAEETCCDFFTNQAYA-------IASSIVSFYVPLVIMVFVYSRVFQ--------------EAKRQLQKIDKSEGR-------------------------CLKEHKALKTLG--------------IIMGTFTLCWLPFFIVNIVHVI---QDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLC------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -224172 for 1909 contacts (-117.4/contact) +
2D Compatibility (PS) -27042 + (NN) -4536 + (LL) 11404
1D Compatibility (HY) -28000 + (ID) 3350
Total energy: -275696.0 ( -144.42 by residue)
QMean score : 0.174
|
|
|