Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGTYNTCGSSDLTWPPAIKLGFYAYLGVLLVLGLLLNSLALWVFCCRMQQWTETRIYMTNLAVADLCLLCTLPF----VLHSLRDTSDTPLCQLSQGIYLTNRYMSISLVTAIAVDRYVAVRHPLRARGLRSPRQAAAVCAVLWVL--VIGSLVARWLLGI----QEGGFCFRS--TRHNFNSMAFP----LLGFYLPLAVVVFC------SLKVVTALAQRPPTDVGQAEATRKAARMVWANLLVFVVCFLPLHVGLTVRLAVGWNACALLETIRRALYITSKLSDANCCLDAICYYYMAKEFQEASALAVAPSAKAHKSQDSLCVTLA |
4EA3 Chain:A ((137-401)) | -------------------------------VGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNA-LCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVA--IMGSAQVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKD----RNLRRITRLVLVVVAVFVGCWTPVQVFV---LAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184184 for 1661 contacts (-110.9/contact) +
2D Compatibility (PS) -24115 + (NN) -7532 + (LL) 4252
1D Compatibility (HY) -21600 + (ID) 4100
Total energy: -237279.0 ( -142.85 by residue)
QMean score : 0.184
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