Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MMWGAGSPLAWLSAGSGNVNVSSVGPAEGPTGPAAPLPSPKAWDVVLCISGTLVSCENALVVAIIVGTPAFRAPMFLLVGSLAVADLLAGLGLVLHFAAV----FCIGSAEMSLVLVGVLAMAFTASIGSLLAITVDRYLSLYNALTYYSETTVTRTYVMLALVWGGALGLGLLPVLAWN------CLDGLTTCGVVYPLSKNHLVVLAIAFFMVFG-------IMLQLYAQICRIVCRHAQQIALQRHLLPASHYVAT-RKGI---ATLAVVLGAFAACWLP------FTVYCLLGDAHSPPLYTYLTLLPATYNSMINPIIYAFRNQDVQKVLWAVCCCCSSSKIPFRSRSPSDV |
3REY Chain:A ((44-299)) | -----------------------------------------------------------------------------FVVSLAAADILVGV-LAIPFAITISTGFCAACHGCLFIACFVLVLA-QSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQPGCGEGQVACLFEDVVPMNYMV-----YFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQP--LPGERARSTLQKEVHAAKSAAIIAGLFALCWLPLHIINCFTFFC-PDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194527 for 1493 contacts (-130.3/contact) +
2D Compatibility (PS) -22565 + (NN) -6666 + (LL) 5984
1D Compatibility (HY) -22400 + (ID) 4050
Total energy: -244224.0 ( -163.58 by residue)
QMean score : 0.227
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