Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNASAASLNDSQVVVVAAEGAAAAATAAGGPDTGEWGPPAAAALGAGGGANGSLELSSQLSAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALRTPMFVLVGSLATADLLAGCGLILHFVFQYLVPSETVSLLTVGFLVASF-------------AASVSSLLAITVDRYLSLYNALTYYSRRTLLGVHLLLAATWTVSLGLGLLPV-LGW------NCLAERAACSVVRPLARSHVALLSAAFFMVFGIMLHLYVRICQVVWRHAHQIALQQHCLAPPHLAATR-----KGVGTLAVVLGTFGASWLPFAIYCVVGSHEDPAVYTYATLL---PATYNSMINPIIYAFRNQEIQRALWLLLCGCFQSKVPFRSRSPSEV |
| 3SN6 Chain:R ((200-490)) | -----------------------------------------------------------------------------------------NVLVITAIAKFERLQTVTNYFITSLACADLVMGLAV---------VPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRQEAINCYAEETCCDFFTNQAYA-IASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGR----------CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLC----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SN6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179027 for 1590 contacts (-112.6/contact) +
2D Compatibility (PS) -24488 + (NN) -11455 + (LL) 6524
1D Compatibility (HY) -21600 + (ID) 3800
Total energy: -233846.0 ( -147.07 by residue)
QMean score : 0.100
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