Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHTVATSGPNASWGAPANASGCPGCGANASDGPVPSPRAVDAWLVPLFFAALMLLGLVGNSLVIYVICRHKPMRTVTNFYIANLAATDVTFLLCCVPFTALLYPLPGWVLGDFMCKFVNYIQQVSVQATCATLTAMSVDRWYVTVFPLRALHRRTPRLALAVSLSIWVGSAAVSAPVLALHR-LSPGPRAYCSEAFPSRALE--RAFALYNLLALYL-LPLLATCACYAAMLRHLGRVA---------------------------VRPAPAD------SALQGQVLAERAGAVRAKVSRLVAAVVLLFAACWGPIQLFLVLQA------LGPAGSWHPRSYAAYALKTWAHCMSYSNSALNPLLYAFLGSHFRQAF-----RRVCPCAPRRPRRPRRPGPSDPAAPHAELLRLGSHPAPARAQKPGSSGLAARGLCVLGEDNAPL |
| 4MBS Chain:A ((28-366)) | -------------------------------------KQIAARLLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLL-TVPFWA-HYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVVAVFASLPNIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTET----LGMTHCCINPIIYAFVGEEFRNYLLVFFQ---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216313 for 2099 contacts (-103.1/contact) +
2D Compatibility (PS) -30542 + (NN) -17113 + (LL) 2044
1D Compatibility (HY) -30800 + (ID) 4050
Total energy: -296774.0 ( -141.39 by residue)
QMean score : 0.303
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