Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGDRRFIDFQFQDSNSSLRPRLGNATANNTCIVDDSFKYNLNGAVYSVVFILGLITNSVSLFVFCFRMKMRSETAIFITNLAVSDLLFVCTLPFKIFYNFNRHWPFGDTLCKISGTAFLTNIYGSMLFLTCISVDRFLAIVYPFRSRTIRTRRNSAIVCAGVWILVLSGGISASLFSTTNVNNATTTCFEGFSKRVWK-TYLSKITIFIEVVGFIIPLILNVSCSSVVLRTLRKPATLSQIGTNKK-----KVLKMITVHMAVFVVCFVPYNSVLFLYALVRSQAITNCFLERFAKIMYPITLCLAT--LNCCFDPFIYYFTLESFQKSFYINAHIRMESLFKTETPLTTKPSLPAIQEEVSDQTTNNGGELMLESTF |
4RWA Chain:A ((127-402)) | -------------------------------------------ALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFL--FAFVVPILIITVCYGLMLL-----------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDID-------RRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLC-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -222295 for 1930 contacts (-115.2/contact) +
2D Compatibility (PS) -25114 + (NN) 3987 + (LL) 6172
1D Compatibility (HY) -27200 + (ID) 3850
Total energy: -268300.0 ( -139.02 by residue)
QMean score : 0.146
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