Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVSVNSSHCFYNDSFKYTLYGCMFSMVFVLGLISNCVAIYIFICVLKVRNETTTYMINLAMSDLLFVFTLPFRIFYFTTRN-WPFGDLLCKISVMLFYTNMYGSILFLTCISVDRFLAIVYPFKSKTLRTKRN-AKIVCTGVWLTVIGGSAP-AVFVQSTHSQGNNASEACFENFPE--ATWKTYLSRIVIFIEIVGFFIPLILNVTCSSMVLKTLTKPVTLSRSKINKTKVLKMIFVHLIIFCFCFVPYNINLILYSLVRTQTFV-NCSVVAAVRTMYPITLCIAVSNCCFDPIVYYFTSDTIQNSIKMKNWSVRRSDFRFSEVHGAENFIQHNLQTLKSKIFDNESAA |
2LNL Chain:A ((46-315)) | -----------------------YALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLP--IWAASKVNGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVH--ATRTLTQKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHP--NNSSPVCYEVLGNDTAKWRMVLR---ILPHTFGFIVPLFVMLFCYGFTLRTLFKA-----HMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHG---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191525 for 1924 contacts (-99.5/contact) +
2D Compatibility (PS) -25649 + (NN) 4044 + (LL) 4956
1D Compatibility (HY) -32000 + (ID) 4750
Total energy: -244924.0 ( -127.30 by residue)
QMean score : 0.166
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