Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTISTLDTELTPINGTEETLCYKQTLSLTVLTCIVSLVGLTGNAVVLW-LLGCRMRRNAFSIYILNLAAADFL------FLSGRLIYSLLSFISIPHTISKILYPVMMFSYFAGLSFLSAVSTERCLSVLWPIWYRCHRPTHLSAVVCVLLWALS-----------LLRSILEWMLCGFLFSGADSAWCQTSDFITVAWLIFLCVVLCGSSLVLLIRILC---------------GSRKIP--LTRLYVTILLTVLVFLLCGLPFGIQFFLFLWIHVD---REVLFCHVHLVSIFLSALNSSANPIIYFFVGSFRQRQNRQNLKLVLQRALQDASEVDEGGGQLPEEILELSGSRLEQ |
| 4N6H Chain:A ((125-407)) | --------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGEL---LCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYW----DTVTK-----ICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAP--IHIFVIVWTLVDIDRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227879 for 1751 contacts (-130.1/contact) +
2D Compatibility (PS) -25020 + (NN) -6612 + (LL) 4552
1D Compatibility (HY) -22400 + (ID) 3600
Total energy: -280959.0 ( -160.46 by residue)
QMean score : 0.174
|
|
|