Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVQGSQRRLLGSLNSTPTAIPQLGLAANQTGARCLEVSISDGLFLSLGLVSLV---ENALVVATIAKNRNLHSPMYCFICCLALSDLLVSGSNVLETAVILLLEAGA-LVARAAVLQ-----QLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVVFSTLFIA--------------YYDH----------VAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRP----VHQGFGLKGAVTLTILLGIFFLCWGPFFLHLTLIVLCPEHPTCGCIFKNFNLFLALIICNAIIDPLIYAFHSQELRRTLKEVLTCSW |
| 2Y02 Chain:A ((3-299)) | --------------------------------AELLSQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVG---------LLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLC---VIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVA-LRVYREAKEQ------------SRVMLMREHKALK---TLGIIMGVFTLCWLPFFL-VNIVNVFNRDLVPDWLFVAFNW---LGYANSAMNPIIYC-RSPDFRKAFKRLLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -286363 for 1776 contacts (-161.2/contact) +
2D Compatibility (PS) -25702 + (NN) -14273 + (LL) 4508
1D Compatibility (HY) -31200 + (ID) 4100
Total energy: -357130.0 ( -201.09 by residue)
QMean score : 0.267
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