Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMEIVSTGNETITEFVLLGFYDIPELHFLFFIVFTAVYVFIIIGNMLIIVAVVSSQRLHKPMYIFLANLSFLDILYTSAVMPKMLEGFLQEATISVAGCLLQFFIFGSL------------ATAECLLLAVMAYDRYLAICYPLHYPLLMGPRRYMGLVVTTWLSGFVVDGLVVALVAQLRFCGPNHIDQFYCDFMLFVGLACSDPRVAQVTTLILSVFCLTIPFGLILTSYARIVVAVLRVPAGASR-----RRAFSTCSSHLAVVTTFYGTLMIFYVAPSAVHSQLLSKVFSLLYTV--VTPLFNPVIYTMRNKEVHQALRKILCIKQTETLD
4LDL Chain:A ((187-463))------------------------------IVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVP-----------FGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVW----IVSGLTSFLPIQMHWYRATHQEAINC----YAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RSPDFRIAFQELLCL-------


General information:
TITO was launched using:
RESULT:

Template: 4LDL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -258814 for 1812 contacts (-142.8/contact) +
2D Compatibility (PS) -25299 + (NN) 92 + (LL) 4908
1D Compatibility (HY) -23600 + (ID) 3300
Total energy: -306013.0 ( -168.88 by residue)
QMean score : 0.348

(partial model without unconserved sides chains):
PDB file : Tito_4LDL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDL-query.scw
PDB file : Tito_Scwrl_4LDL.pdb: