Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPTFNGSVFMPSAFILIGIPGLESVQCWIGIPFSAMYLIGVIGNSLILVIIKYENSLHIPMYIFLAMLAATDIALNTCILPKMLGIFWFHLPEISFDACLFQMWLIHSFQAI--ESGI--LLAMALDRYVAICIPLRHATIFSQQFLTH-IGLGVTLRAAILIIPSLGLIKCCLKHYRTTVISHSYCEHMAIVKLATEDIRVNKIYGLFVAFAILGFDIIFITLSYVQIFITVFQ---------LP--------QKE---ARFKAFNTCIAHICVFLQFYLLAFFSFFTHRFGSHIP---PYIHILLSNLYLLVPPFLNPIVYGVKTKQIRDHIVKVFFFKKVT |
3REY Chain:A ((15-302)) | ----------------------------------AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVGVLAIPFAITI------STGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIAIPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-----------GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGLFALC-WLPLHIINCFTFFCPDC-SHAPLWLMYLAIVLAHTNSVV----NPFIYAYRIREFRQTFRKIIRS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3REY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249405 for 1902 contacts (-131.1/contact) +
2D Compatibility (PS) -25595 + (NN) -3668 + (LL) 3716
1D Compatibility (HY) -25200 + (ID) 3650
Total energy: -303802.0 ( -159.73 by residue)
QMean score : 0.307
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