Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPSNITSTHPAVFLLVGIPGLEHLHAWISIPFCFAYTLALLGNCTLLFIIQADAALHEPMYLFLAMLATIDLVLSSTTLPKMLAIFWFRDQEINFFACLVQMFFLHSFSIM----ESAVLLAMAFDRYVAICKPLHYTTVLTGSLITKIGMAAVARAVTLMTPL-----PFLLRRFHYCRG--PVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAM--FIVVLDLLFVILSYVF-----ILQAVLQLASQEARYKAFGTCVSHIGAILSTYT----PVVISSVMHRVARH-AAPRVHILLA-IFYLLFPPMVNPIIYGVKTKQIREYVLSLFQRKNM |
| 4QKX Chain:A ((197-447)) | ----------------------------------------VFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILTKTWTFGNFWCE----FWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKN---------KARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEE------TCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ---KFALKE--HKALKT----LGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYV--NSGFNPLIYCRSPDFRIAFQELLCL---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -190805 for 1505 contacts (-126.8/contact) +
2D Compatibility (PS) -22756 + (NN) -10380 + (LL) 7216
1D Compatibility (HY) -24400 + (ID) 3700
Total energy: -244825.0 ( -162.67 by residue)
QMean score : 0.274
|
|
|