Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MERINHTSSVSEFILLGLSSRPEDQKTLFVLFLIVYLVTITGNLLIILAIRFNPHLQTPMYFFLSFLSLTDICFTTSVVPKMLMNFLSEKKTISYAGCLTQMYFLYALGNSDSCL--------LAVMAFDRYVAVCDPFHYVTTMSHHHCVLLVAFSCSFPHLHSLLHTLLLNRLTFCDSNVIHHFLCDLSP-VLKL----SCSSIFVNEIVQMTEAPIVLVTRFLCIAFSYIRIL----TTVLKIPSTSGKR---------KAFSTCGFYLTVVTLFYGSIFCVYLQPPSTYAVKDHVATIVYTVL------SSMLNPFIYSLRNKDLKQGLRKLMSKRS |
| 2Y01 Chain:A ((6-300)) | -----------------LSQQWEAGMSL--LMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--------FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVII---CTVWAISALVSFL----------PIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNI---VNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183526 for 1719 contacts (-106.8/contact) +
2D Compatibility (PS) -24861 + (NN) -1083 + (LL) 4108
1D Compatibility (HY) -32400 + (ID) 3650
Total energy: -241412.0 ( -140.44 by residue)
QMean score : 0.171
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