Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGTDNQTWVSEFILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTPMYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLAL----GGIEFVLLAVMAYDRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISSPVQTAITFQLPMCRNKFIDHISCELLAVVRLACVDTSSNEVTIMVSSIVLLMTPFCLV----LLSYIQIISTILKIQSREGRK---------KAFHTCASHLTVVALCYGVAIFTYIQPHSSPSVLQEKLFSVF----YAILTPMLNPMIYSLRNKEVKGAWQKLLWKFSGLTSKLAT |
| 2Y02 Chain:A ((6-299)) | ----------------LSQQWEAGMSLLMALVVLLIVA--GNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVP--FGATLVVRGTWLWGSFLCELWTSLDVLCVTASIE--TLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWA-------ISALVSF-LPIMMHWWRDEDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQ-----------SRVMLMREHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYA--NSAMNPIIYC-RSPDFRKAFKRLLA----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Y02.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -209968 for 1852 contacts (-113.4/contact) +
2D Compatibility (PS) -26566 + (NN) -8687 + (LL) 4320
1D Compatibility (HY) -26800 + (ID) 3700
Total energy: -271401.0 ( -146.54 by residue)
QMean score : 0.203
|
|
|