Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVWENQTFNSIFILLGIFNHSPTHTFLFSLVLGIFSLALMENISMVLLIYIEKQLHTPMYFLLSQLSLMDLMLICTTLPKMIFSYLSGKKSISLAGCGTQIFFYVSLLGAECFL--LAVMAYDRYVAICHPLQYTILMNPKLCVFMTVASWTLGSLDGIIVLAAVLSFSYCSSL-EIHHFFCDVAALLPLSCTETSAFERLLVICCVVMLIFPVSVIILSYSHVLRAVIHMGSGESRRKAFTTCSSHLSVVGL--------------YYGAAMFMYMRPASKHTPDQDKMVSAFYTILTPMLNPLIYSLRNKEVFRALQKVLKKRKLI |
| 4J4Q Chain:A ((66-314)) | ----------------------------------------------------KKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFF--ATLGGEIALWSLVVLAIERYVVVCKPMS-NFRFGENHAIMGVAFTWVMA-----LACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESF---VIYMFVVHFIIPLIVIFFCYGQLVFTVKE--AAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPI-FMTIPAFFAKTSAVYNPVIYIMMNKQ-FRNCMVTTLCCGKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197394 for 1655 contacts (-119.3/contact) +
2D Compatibility (PS) -23152 + (NN) -4119 + (LL) 6336
1D Compatibility (HY) -20400 + (ID) 3000
Total energy: -241729.0 ( -146.06 by residue)
QMean score : 0.240
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