Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDPQNYSLVSEFVLHGLCTSRHLQNFFFIFFFGVYVAIMLG---NLLILVTVISDPCLHSSPMYFLLGNLAFLDMWLASFATPKMIRDFLSDQKLISFGGCMAQIFFLHFTGGAEMVLLVSMAYDRYVAICKPLHYMTLMSWQTCIRLVLASWVVGFVHSISQVAFT-VNLPYCGPNEVDSFFCDLPLVIKLAC-MDTYVLGIIMISDSGLLSLSC--FLLLLI---------SYTVILLAIRQRAAGSTSKALSTCSAHIMVVTLFF--------GPCIFVYVRPFSRFS-VDKLLSVFYTIFTPLLNPIIYTLRNEEMKAAMKKLQNRRVTFQ |
4J4Q Chain:A ((48-317)) | -------------------------------------IMLGFPINFLTLYVTVQHKKLRT-PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKP----------------MSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J4Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -166293 for 1757 contacts (-94.6/contact) +
2D Compatibility (PS) -24234 + (NN) -477 + (LL) 5056
1D Compatibility (HY) -18000 + (ID) 3200
Total energy: -207148.0 ( -117.90 by residue)
QMean score : 0.224
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