Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MENKTEVTQFILLGLTNDSELQVPLFITFPFIYIITLVGNLGIIVLIFWDSCLHNPMYFFLSNLSLVDFCYSSAVTPIVMA---GFLIEDKVISYNACAAQMYI--FVAFATVEN-YLLASMAYDRYAAVCKPLHYTTTMTTTVCARLAIGSYLCGFLNASIHTGDTFSLSFC---KSNEVHHFFCDIPAVMVLSCSDRHISELV-LIYVVSFNIF----IALLVILISYTFIFITILKM------HSASVYQKPLSTCASHFIAVGIFYGTII-------FMYLQPSSSHSMDTDKMAPVFYTMVIPMLNPLVYSLRNKEVKSAFKKVVEKAKLSVGWSV 2YDO Chain:A ((16-304)) -------------------------------IAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFC--------AACHGCLFIACFVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTR-AKGIIA--ICWVLSFAIGLTPMLGWNNCGQPKEGKAHSQGCGEGQVACL------FEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLKQMES----TLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPF

General information: TITO was launched using: RESULT: Template: 2YDO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output 3D Compatibility (PKB) -226096 for 1875 contacts (-120.6/contact) + 2D Compatibility (PS) -25346 + (NN) -3860 + (LL) 3592 1D Compatibility (HY) -24400 + (ID) 3500 Total energy: -279610.0 ( -149.13 by residue) QMean score : 0.269

(partial model without unconserved sides chains): PDB file : Tito_2YDO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2YDO-query.scw PDB file : Tito_Scwrl_2YDO.pdb: