Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWGRLLLWPLVLGFSLSGGTQTPSVYDESGSTGGGDDSTPSILPAPRGYPGQVCANDSDTLELPDSSRALLLGWVPTRLVPALYGLVLVVGLPANGLALWVLATQAPRLPS--TMLLMNLAAADLLLALALPPRIAYHLRGQRWPFGEAACRLATAALYGHMYGSVLLLAAVSLDRYLALVHPLRARALRGRRLALGLCMAA--WLMAAALALPLTLQRQTFRLARSDR----VLCHDALPLDAQASHWQPAFTC-LALLGCFLPLLAMLLCYGATLHTL-----------------------------------------------------AASGRRYGHALRLTAVVLASAVAFFVPSNLLLLLH-----YSDPSPSAWGNLYGAYVPSLALSTLNSCVDPFIYYYVSAEFRDKVRAGLFQRSPGDTVASKASAEGGSRGMGTHSSLLQ |
| 4MBS Chain:A ((30-366)) | --------------------------------------------------------------------------IAARLLPPLYSLVFIFGFVGNMLVILIL-INYKRLKSMTDIYLLNLAISDLFFLLTVP--FWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAV--FALKARTVTFGVVTSVITWVVAVFASLPNII------FTRSQKEGLHYTCSSHFPY-SQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEEFRNYLLV-FFQ---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -229532 for 1972 contacts (-116.4/contact) +
2D Compatibility (PS) -29117 + (NN) -20576 + (LL) 2992
1D Compatibility (HY) -36800 + (ID) 4250
Total energy: -317283.0 ( -160.89 by residue)
QMean score : 0.355
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