Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSTCIEEQHDLDHYLFPIVYIFVIIVSIPANIGSLCVSFLQAKKESELGIYLFSLSLSDLLYALTLPLWIDYTWNKDNWTFSPALCKGSAFLMYMNFYSSTAFLTCIAVDRYLAVVYPLKFFFLRTRRFALMVSLSIWILETIFNAVMLWEDETVVEYCDAEKSNFTLCYDKYPLEKWQINLNLFRTCT----GYAIPLVTILICNRKVYQA-VRHNKAT------------------------------------------------ENKEKKRIIKLLVSITVTFVLCFTPFHVMLLIRCILEHAVNFEDHSNSGKRTYTMYRITVALTSLNCVADPILYCFVTETGR------YDMWNILKFCTGRCNTSQRQRKRILSVSTKDTMELEVLE |
| 4MBS Chain:A ((34-366)) | ---------------LLPPLYSLVFIFGFVGNMLVILILINYKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYA--AAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAVVHAVFALKARTVTFGVVTSVITWVV-----AVFASLPNIIFTRSQKEGLHYT-CSSHFPYSQYQFWKN-FQTLKIVILGLVLPLLVMVICYSGILKTLLRMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEEEKKRHRDVRLIFTIMIVYFLFWAPYNIVLLLNTFQEF-FGLNNCSSSNRLDQAM-QVTETLGMTHCCINPIIYAFVGEEFRNYLLVFFQ------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MBS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199950 for 2010 contacts (-99.5/contact) +
2D Compatibility (PS) -27322 + (NN) 2514 + (LL) 5192
1D Compatibility (HY) -34400 + (ID) 3950
Total energy: -257916.0 ( -128.32 by residue)
QMean score : 0.251
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