Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWV--AIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFC-NLVIIR----TLLMQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHH---VVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN |
| 5C1M Chain:A ((23-294)) | --------------------LYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIF--NLALADALATSTLPFQSVNYL-MGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFM-----ATTKYRQGSIDCTLTFSHPTWYWENLLKICVFI-FAFIMPVLIITVCYGLMILRLKSVRMLSGSKEKDRNL---RRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGY--------TNSCLNPVLYAFLDENFKRCF-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241487 for 1895 contacts (-127.4/contact) +
2D Compatibility (PS) -26420 + (NN) -6411 + (LL) 5524
1D Compatibility (HY) -27600 + (ID) 4400
Total energy: -300794.0 ( -158.73 by residue)
QMean score : 0.206
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