Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESGLLRPAPVSEVIVLHYNYTGKLRGARYQPGAGLRADAVVCLAVCAFIVLENLAVLLVLGRHPRFHAPMFLLLGSLTLSDLLAGAAYAANILLSGPLTLKLSPALWFAREGGVFVAL------TASVLSLLAIALERSLTMARRGPAPVSSRG-----RTLAMAAAAWGVSLLLGLLPALGWNCLGRLD-------AC--STVLPLYAKAYVLFCVLAFVGILAAICALYARIYCQVRANARRLPARP---GTAGTTSTRARRKPRSLALLRTLSVVLLAFVACWGPLFLLLLLDVACPARTCPVLLQADPFLGLAMANSLLNPIIYTLTNRDLRHALLRLVCCGRHSCGRDPSGSQQSASAAEASGGLRRCLPPGLDGSFSGSERSSPQRDGLDTSGSTGSPGAPTAARTLVSEPAAD |
| 3RFM Chain:A ((7-303)) | ------------------------------------SVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADILVG-------VLAIPFAITISTGFCAACHGCLFIACFVLVLAQSSIFSLLAIAIDRYIAIA----IPLRYNGLVTGTRAAGIIAICWVLSFAIGLTPMLGWNNCGQP-GCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLML-GVYLRIFAAARRQLKQMESQPLPGERARSTLQKEVHAAKSAAIIAGL------FALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLAHTNSVVNPFIYAYRIREFRQTFRKIIRS--------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216410 for 1973 contacts (-109.7/contact) +
2D Compatibility (PS) -27858 + (NN) -18558 + (LL) 3896
1D Compatibility (HY) -26000 + (ID) 3850
Total energy: -288780.0 ( -146.37 by residue)
QMean score : 0.310
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