Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVLAPAWSPTTYLLLLLLLSSGLSGTQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDEELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTEIHFVTKCAFQPPPSCLRFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQPDSSTLPPPWSPRPLEATAPTAPQPPLLLLLLLPVGLLLLAAAWCLHWQRTRRRTPRPGEQVPPVPSPQDLLLVEH |
| 2L8S Chain:A ((1-46)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MGLPGRVPLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8419 for 172 contacts (-48.9/contact) +
2D Compatibility (PS) -5257 + (NN) -12425 + (LL) 13164
1D Compatibility (HY) -2800 + (ID) 500
Total energy: -16237.0 ( -94.40 by residue)
QMean score : 0.270
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