Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGQVSSALSPCISYARGNGASPSVACCSGVRSLASSARSTADKQAACKCIKSAAAGLNAGKAAGIPTKCGVSVPYAISSSVDCSKIR
3F52 Chain:A ((22-98))
---EPLLREALGAALRSFRADKG----------VTLRELAEASRVSPGYLSELERGRKEVSSELLASVCHALGASVADVLIEAAGSMALQ
General information:
TITO was launched using:
RESULT:
Template:
3F52.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18004 for 556 contacts (-32.4/contact) +
2D Compatibility (PS) -7730 + (NN) 2489 + (LL) 552
1D Compatibility (HY) -1600 + (ID) 450
Total energy: -24743.0 ( -44.50 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_3F52.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F52-query.scw
PDB file :
Tito_Scwrl_3F52.pdb
: