Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------ALSCGQ-------VDSKLAPCVAYVTGRASSISKECCSGVQGLNGMAR----SSSDRKIACRCLKSLATSIKSI--NMGKVSGVPGKCGVSVPFPISMSTNCDTVN-
4HR1 Chain:A ((3-120))
FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKERVDEIATAVNWDVYAQYARGDFNLLSDDEYKEIQKALLVLEDIKEQIIVEMLRVGLAQGQMG-----TLKISDYLDSLDS
General information:
TITO was launched using:
RESULT:
Template:
4HR1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22263 for 472 contacts (-47.2/contact) +
2D Compatibility (PS) -8698 + (NN) 1174 + (LL) 348
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -32289.0 ( -68.41 by residue)
QMean score : 0.357
(partial model without unconserved sides chains):
PDB file :
Tito_4HR1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR1-query.scw
PDB file :
Tito_Scwrl_4HR1.pdb
: