Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------ISCSTVYST--LMPCLQYVQQGGSP----------------------ARGCCTGIQNLLAEANNSPDRRTICGCLKNVA-NGASGGPYITRAAALPSKCNVALPYKISPSVDCNSIH
1PSY Chain:A ((1-125))
AEFMESKGEREGSSSQQCRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGVRCMRQTRTN-------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28701 for 624 contacts (-46.0/contact) +
2D Compatibility (PS) -8076 + (NN) 4889 + (LL) 312
1D Compatibility (HY) -1600 + (ID) 750
Total energy: -33926.0 ( -54.37 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: