Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVVGGWGIEEKAACIVTNLMSCLPAILKGSQPPAYCCEMLKEQQSCLCGYIKSPTF------------GHYVIPQNAHKLLAACGILYPKC
2FQ3 Chain:A ((311-395))
---SKWFNLEK---IHSIEVQSLPEFFTNRIPSKTPEVYMRYRNFMVNSYRLNPNEYFSVTTARRNVSGDAAALFRLHKFLTKWGLINYQV
General information:
TITO was launched using:
RESULT:
Template:
2FQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42747 for 443 contacts (-96.5/contact) +
2D Compatibility (PS) -7796 + (NN) -5290 + (LL) 780
1D Compatibility (HY) -1200 + (ID) 700
Total energy: -56953.0 ( -128.56 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_2FQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FQ3-query.scw
PDB file :
Tito_Scwrl_2FQ3.pdb
: