Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------AEGAGECGRSSPDRMALRMAPCISAADEPDSAPSSSCCSAVHTIGKSPSCLCAVMLSGTAKMAGIKPEVAI-----TIPKRCNMADRPVGYK-------CGDYTLP---------
3FKE Chain:A ((218-340))
DISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAAPPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTLGLKI
General information:
TITO was launched using:
RESULT:
Template:
3FKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9461 for 606 contacts (-15.6/contact) +
2D Compatibility (PS) -9868 + (NN) -1474 + (LL) 0
1D Compatibility (HY) -800 + (ID) 850
Total energy: -22453.0 ( -37.05 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_3FKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKE-query.scw
PDB file :
Tito_Scwrl_3FKE.pdb
: