Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAGTECQNDVEVLK---TTCYKFVEKD-----GPKLQPSPDCCTSMKGVNVPCVCTYLGSPGVRDNINMDKVFYVTKQCGIAIPGNCGGSKV------------------------------------
1HSS Chain:A ((5-124))
----MCYPGQAFQVPALPACRPLLRLQCNGSQVP-EAVLRDCCQQLAHISEWCRCGALYS--MLDS--MYKEH--------GAFPRCRREVVKLTAASITAVCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19942 for 390 contacts (-51.1/contact) +
2D Compatibility (PS) -6566 + (NN) 3200 + (LL) 652
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -25806.0 ( -66.17 by residue)
QMean score : 0.223
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: