Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----QTECVSKIVPCFRFLNT--TTKPSTDCCNSIKEAMEKDF--SCLCTIYNTPGLLAQFNITTDQALGLNLRCGVNTDLSACSGTLILQDLRPLQL-------
1NLX Chain:A ((4-107))
ATTEEQKLIEDVNASFRAAMATTANVPPADKYKTFEAAFTVSSKRNLADAVSKAPQLVPKLDEVYNAAY-NAADHAAPEDKYEAFVLHFSEALRIIAGTPEVHAV
General information:
TITO was launched using:
RESULT:
Template:
1NLX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35299 for 600 contacts (-58.8/contact) +
2D Compatibility (PS) -9368 + (NN) -3899 + (LL) -172
1D Compatibility (HY) 1200 + (ID) 550
Total energy: -48088.0 ( -80.15 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1NLX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NLX-query.scw
PDB file :
Tito_Scwrl_1NLX.pdb
: