Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VYRPWPSECVEVANVMVEQCKMFFVHQESPPTAECCRWFSSRRKYAKERRRLCRCLEFLTT-AFKNLKPD-VLALSDQCHFSSGFPMSRDHTCA
1L6H Chain:A ((9-64))
-----------------TVCTGA-IAGGARPTAACCSSLRA--------QQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIA------------
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12222 for 325 contacts (-37.6/contact) +
2D Compatibility (PS) -5293 + (NN) 258 + (LL) 2728
1D Compatibility (HY) 400 + (ID) 450
Total energy: -14579.0 ( -44.86 by residue)
QMean score : 0.106
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: