Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------QDNNPLEHC--RDVFVSFMPCMGFVEGIFQQPSPDCCRGVTHLNNVVKFT-------SPGSRNRQDS----GETERVCLCIEIMGNANHLPFLPAAINNLP--------LRCSLTLSFPISVDMDCSQFRNTKNPDVEKLN-------------- |
| 1MW5 Chain:A ((3-164)) | ETDLLMKVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEENWHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRHLQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVSMEYWHALEYKGELN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1MW5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37605 for 756 contacts (-49.7/contact) +
2D Compatibility (PS) -12159 + (NN) -13 + (LL) 0
1D Compatibility (HY) -6400 + (ID) 800
Total energy: -56977.0 ( -75.37 by residue)
QMean score : 0.134
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