Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--QNICPRVNRIVTPCVAYGLGRAPIAPCCRALNDLRFVNTRNLRRAACRCLVGVVNRNPGLRRNPRFQNIPRDCRNTFVRPFWWRPRIQCGRIN
1Z9E Chain:A ((347-429))
SMDSRLQRIHAEIKNSL--KIDNLDVNRCIEALDELASLQVTMQQAQKHTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLV----------
General information:
TITO was launched using:
RESULT:
Template:
1Z9E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48324 for 546 contacts (-88.5/contact) +
2D Compatibility (PS) -7855 + (NN) 4886 + (LL) 728
1D Compatibility (HY) -4400 + (ID) 400
Total energy: -55365.0 ( -101.40 by residue)
QMean score : 0.212
(partial model without unconserved sides chains):
PDB file :
Tito_1Z9E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z9E-query.scw
PDB file :
Tito_Scwrl_1Z9E.pdb
: