Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACNPSELMACASSILQSKP-PTAQCCAKLKE-----------QQPCFCQYKKDPSLKGY--INPANFKKV-AACRVQVPKC
1AFH Chain:A ((9-80))
----SAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10427 for 367 contacts (-28.4/contact) +
2D Compatibility (PS) -5836 + (NN) -1373 + (LL) 488
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -21148.0 ( -57.62 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: