Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASCNAG--QLAACAPAITAGAT-PSASCCSNLKA-----------QQGCFCQFVKNPTYGRY--INSPNARKVVASCGVSVPRC
1AFH Chain:A ((3-80))
-SCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNC--LKNAA-AGVSGLNAGNAASIPSKCGVSIP--
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33219 for 423 contacts (-78.5/contact) +
2D Compatibility (PS) -6042 + (NN) 897 + (LL) 644
1D Compatibility (HY) -4800 + (ID) 1100
Total energy: -43620.0 ( -103.12 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: