Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSCNTDLTDLVSKCQRFV----------IKTGPKFSPSPSCCAVVKNV-DVACVCDLITKEIED----------MIDMDKMVYVARSCGKKISAGTKCGNTQANAGGIVSGYIVPTA----------------------
1EXZ Chain:A ((4-139))
--CRNRVTNNVKDVTKLVANLPKDYMITLKYVPGMDVLPSHCWISEMVVQLSDSLTDLLDKFSNISEGLSNYSIIDKLVNIVDDLVECVKE----NSSKDLKKSFKSPEPRLFTPEEFFRIFNRSIDAFKDFVVASDCV
General information:
TITO was launched using:
RESULT:
Template:
1EXZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19839 for 525 contacts (-37.8/contact) +
2D Compatibility (PS) -9647 + (NN) -8178 + (LL) 240
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -41724.0 ( -79.47 by residue)
QMean score : 0.220
(partial model without unconserved sides chains):
PDB file :
Tito_1EXZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EXZ-query.scw
PDB file :
Tito_Scwrl_1EXZ.pdb
: