Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----ADDDAVLLCNMTRGG-LEACKPSVRSGSSDPAA--------DPSKECCAALAGADLPCLCSYRHSFLLPSLGID-----PDLALQLPAKCNLTATPGC--
1S6D Chain:A ((1-103))
PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQP-CQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38015 for 557 contacts (-68.2/contact) +
2D Compatibility (PS) -8439 + (NN) -3876 + (LL) -172
1D Compatibility (HY) -6000 + (ID) 1000
Total energy: -57502.0 ( -103.24 by residue)
QMean score : 0.334
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: