Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------AISCSDV-IKDLRPCVNYLTSGTGKPPSACCAGASALQSAASSTADKKAACECIKSASKSLNPNP-------QLAQALPANCGINLPYTISPSVDCSK
2OCC Chain:E ((5-109))
HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALR---ACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV---
General information:
TITO was launched using:
RESULT:
Template:
2OCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25682 for 541 contacts (-47.5/contact) +
2D Compatibility (PS) -9158 + (NN) -6572 + (LL) 360
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -43002.0 ( -79.49 by residue)
QMean score : 0.430
(partial model without unconserved sides chains):
PDB file :
Tito_2OCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCC-query.scw
PDB file :
Tito_Scwrl_2OCC.pdb
: