Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----------TRVESFGEVAQSCVVTELAPCLPAMTLTGDPTTECCDKLVEQ-----KPCLCGYIRNPAYSMYVTSPNARKVLDFCKVPFPSC
1QAS Chain:A ((205-298))
YKMLTQRAEIDRAFEEAAGSAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNAFSLAHRRVYQDM
General information:
TITO was launched using:
RESULT:
Template:
1QAS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40222 for 489 contacts (-82.3/contact) +
2D Compatibility (PS) -7929 + (NN) -2510 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 500
Total energy: -52361.0 ( -107.08 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1QAS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QAS-query.scw
PDB file :
Tito_Scwrl_1QAS.pdb
: