Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECPRST-P-D--MEAMKLI----PCASAASDSNAP-VSSGCCAQVKT--LGHNPKCLCAVMLSNTAKSS--GVKPEVAVTIPKRCNLADRPIGYKC---GAYTLP------------
2OVS Chain:A ((1-118))
-GLVPRGSMIMKDGIYSIIFISNEDSCGEGILIKNGNMITGGDIASVYQGVLSEDEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYAKFIEPLV
General information:
TITO was launched using:
RESULT:
Template:
2OVS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13654 for 494 contacts (-27.6/contact) +
2D Compatibility (PS) -9760 + (NN) -1490 + (LL) 144
1D Compatibility (HY) -7200 + (ID) 1050
Total energy: -33010.0 ( -66.82 by residue)
QMean score : 0.265
(partial model without unconserved sides chains):
PDB file :
Tito_2OVS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OVS-query.scw
PDB file :
Tito_Scwrl_2OVS.pdb
: