Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVPLIAKKCNVDINIPPINDKTDCSKAVSSIMPKSL
4DV7 Chain:U ((2-25))
-----------------------------------------------GKGDRRT--RRGKIWRGTYGKYRPRK-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4DV7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 8420 for 121 contacts (69.6/contact) +
2D Compatibility (PS) -2593 + (NN) -2175 + (LL) 4276
1D Compatibility (HY) 400 + (ID) 350
Total energy: 7978.0 ( 65.93 by residue)
QMean score : 0.022
(partial model without unconserved sides chains):
PDB file :
Tito_4DV7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DV7-query.scw
PDB file :
Tito_Scwrl_4DV7.pdb
: