Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QINTPCSPSM---LSTFTPCINFLRN-----STANGTSPTADCCKSLQTLTSGGRDCLCLIVTGSV-------------PFQIPINRTLAISLPRACNMPGVPVQ-------CKV-------
1HSS Chain:A ((5-124))
----MCYPGQAFQVPALPACRPLLRLQCNGS-QVP-EAVLRDCCQQLAHIS---EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITA--VCRLPIVVDASGDGAYVCKDVAAYPDA
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67341 for 483 contacts (-139.4/contact) +
2D Compatibility (PS) -7427 + (NN) 3245 + (LL) -316
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -76289.0 ( -157.95 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: