Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------SEVPTSRGGMSPTQCKEKQRLLVNACSAV---MFGHSPSSDCCKHVRLTQVQCVCPAITSKLAGLVGVEHTIKQIESCGRTVPRNFKCGI--
1P68 Chain:A ((1-102))
MYGKLNDLLEDLQEVLKNLHKNWHG-GKDNLHDVDNHLQNVIEDIHDFMQGGGSGGKLQE--MMKEFQQVLDELNNHLQG---GKHTVHHIEQNIKEIFHHLEELVHR
General information:
TITO was launched using:
RESULT:
Template:
1P68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21082 for 549 contacts (-38.4/contact) +
2D Compatibility (PS) -8521 + (NN) -1448 + (LL) 640
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -35061.0 ( -63.86 by residue)
QMean score : 0.293
(partial model without unconserved sides chains):
PDB file :
Tito_1P68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P68-query.scw
PDB file :
Tito_Scwrl_1P68.pdb
: