Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITD---------FNCFCSMLLNQGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAIP
1T12 Chain:A ((8-76))
---TSNLAPCLAYLRNTG--PLGRCCGGVKALVNSARTTEDRQIACTC--LKSAAGAISGINLGKAAGLPSTCGVN---------------
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13165 for 387 contacts (-34.0/contact) +
2D Compatibility (PS) -5997 + (NN) -2325 + (LL) 956
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -24431.0 ( -63.13 by residue)
QMean score : 0.151
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: