Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------ALSCSTV-YNTLMPCLGYVQSGGTVPRACCTGIKRLVSGARSTQDRRTVCVCLKNVSS-----GAKGGPYLTRAAGLPARCGVPLPYKTGPNDSCSSIPIYW
2OCC Chain:E ((5-109))
HETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKI--IDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELGISTPEELGLDKV--------
General information:
TITO was launched using:
RESULT:
Template:
2OCC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45871 for 576 contacts (-79.6/contact) +
2D Compatibility (PS) -8877 + (NN) -1883 + (LL) 396
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -58785.0 ( -102.06 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2OCC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OCC-query.scw
PDB file :
Tito_Scwrl_2OCC.pdb
: