Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSLEILENRIRDSDHQFTRYAVCECFKASDNDKQVLVNENLLEVQVLCGPHVPYPI------------TSYSDCLQYADEEIARTAL
3LXQ Chain:A ((246-284))
------------------------------------------------------------------------------FTSSNHSPYEYPEGKIEQYDSEHMTRNNAVKYSDYALGT---
General information:
TITO was launched using:
RESULT:
Template:
3LXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4155 for 128 contacts (-32.5/contact) +
2D Compatibility (PS) -2890 + (NN) 294 + (LL) 6196
1D Compatibility (HY) -400 + (ID) 250
Total energy: -1205.0 ( -9.41 by residue)
QMean score : 0.105
(partial model without unconserved sides chains):
PDB file :
Tito_3LXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LXQ-query.scw
PDB file :
Tito_Scwrl_3LXQ.pdb
: