Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DDDATLDCDSQVNGLAGNCMTAVLIGTKPSSKCCKFVRSAQL----------DCLCSKITKDVTKMITEHLLNTALKIAKQCNWELP----HNYQCGSYTFP
1SIY Chain:A ((2-90))
------TCGQVQGNL-AQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLK---AAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI---
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38049 for 527 contacts (-72.2/contact) +
2D Compatibility (PS) -7427 + (NN) -843 + (LL) 652
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -48467.0 ( -91.97 by residue)
QMean score : 0.320
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: