Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSST------SFPGAQCCSSL-----T-RFRGNPDCLCSTMLTARQQFTFSVPNAFTIP-------ERCGYANEIPPHYK----CGNYVVGH-----
3FQ6 Chain:A ((2-115))
NATAFVPALVASGLPNEKFCFEGFLPQKKGRQTRLKALAEEHRTMVFYESPHRLLKTLTQFAEYFGTERQATVSREISKLHEETVRGSLAELIEHFTATEPRGEIVIVLAGIDD
General information:
TITO was launched using:
RESULT:
Template:
3FQ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22386 for 562 contacts (-39.8/contact) +
2D Compatibility (PS) -9079 + (NN) 1209 + (LL) 0
1D Compatibility (HY) -1600 + (ID) 900
Total energy: -32756.0 ( -58.28 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_3FQ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FQ6-query.scw
PDB file :
Tito_Scwrl_3FQ6.pdb
: