Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACDATNNMGKLLPCRQAAVKNGKDPKQLAGCCDAVKPFSG-SKD----AADCLCQSLLAAQKVDKTVDLHSAIAIPAKCGIPVQ----ANLNCNGMAVPQH
1BWO Chain:A ((7-88))
-------DSLVRPCLSYVQG-GPGP--SGQCCDGVKNLHNQARSQSDRQSACNCLKGIAR-GI-HNLNEDNARSIPPKCGVNLPYTISLNIDCS-------
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20285 for 452 contacts (-44.9/contact) +
2D Compatibility (PS) -7516 + (NN) -3997 + (LL) 704
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -35694.0 ( -78.97 by residue)
QMean score : 0.286
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: