Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------AVSAAKCKEERRLGINACKAVVYGKSP--TPACCHRMRVTHLGCVCSVITP-----KLAALVDVNRMIELVKGCGRKLPRHYKCGS-------ITFP---
1OH1 Chain:A ((1-109))
GSMEQFELFSIDKFKCNSEAKYYLNIIEGEWHPQDLNDSPLKFILSTSDDSDYICKYINTEHKQLTLYNKNNSSIVIEIFIPNDNKILLTIMNTEALGTSPRMTFIKHK
General information:
TITO was launched using:
RESULT:
Template:
1OH1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42933 for 485 contacts (-88.5/contact) +
2D Compatibility (PS) -8616 + (NN) 3826 + (LL) 0
1D Compatibility (HY) -4000 + (ID) 650
Total energy: -52373.0 ( -107.99 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_1OH1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OH1-query.scw
PDB file :
Tito_Scwrl_1OH1.pdb
: