Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADCKEERRVAINACKPILYGKDPTPACCERIR-VTHIECVC-PVITPKLAALVDV-------NRMVRLIEGCGRNVPRHYKCG-------SITTP
2RAQ Chain:A ((3-95))
--AKGLIRIVLDILKPHEPIIPEYAKYLSELRGVEGVNITLMEIDKETENIKVTIQGNDLDFDEITRAIESYGGSIHSVDEVVAGRTMVEEVTTP
General information:
TITO was launched using:
RESULT:
Template:
2RAQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47294 for 449 contacts (-105.3/contact) +
2D Compatibility (PS) -8024 + (NN) 717 + (LL) 68
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -58433.0 ( -130.14 by residue)
QMean score : 0.208
(partial model without unconserved sides chains):
PDB file :
Tito_2RAQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RAQ-query.scw
PDB file :
Tito_Scwrl_2RAQ.pdb
: